Rational selection of optimized experimental conditions for chromatographic separation of analytes is realized nowadays by means of specialized method development software. Two such programs, DryLab (LC Resources, USA, in Europe: Molnár-Institut, Berlin) and ChromSword (Merck, Darmstadt), were compared in a few aspects in this paper. The aim was to make a comparison of the quality of the software packages in the separation of neutral compounds, performed isocratically in RP-HPLC systems. A discussion of the differences in predicted and experimental chromatographic retention parameters is reported. The conclusion reached is, that the two programs provide good predictions of retention data, when predictions are based on %B changes using two initial experimental runs. An additional option of ChromSword, employing the quantitative structure-retention relationship (QSRR), did not to provide precise predictions of the separation, because molecular structural data were used as inputs. Predictions based on molecular structure were unaccurate. The comparison of the performance was only done with ca. 5% of the funtional capabilities, which DryLab was offering. Gradient data were not compared at all.